Fish community structure and inhabit status of endangered fish species were investigated during April to November 2011 in Baebong Stream, Gangwon do, Korea. The number of fish species inhabiting the upper section (Stations 1~3, 5) was 14 and the stream bottoms were mostly composed of cobbles and boulders (Aa-type). Meanwhile, the number of fish species inhabiting the lower section (Stations 4, 6, 7) was 26 and the stream bottoms were mostly composed of pebbles, cobles and sand (Bb-type). A total of 26 species belonging to ten families were found in the stream during the survey period. The dominant and subdominant species were Rhynchocypris steindachneri (31.1%) and Squalidus multimaculatus (13.3%), respectively, and others such as Pungitius kaibarae (11.0%), Zacco koreanus (7.8%), Misgurnus anguillicaudatus (7.0%), Iksookimia pacifica (5.5%) and Z. platypus (5.3%) were followed in the order. Four species of Squalidus multimaculatus, Z. koreanus, I. pacifica and Liobagrus andersoni were endemic to Korea. And, Lethenteron japonica, L. reissneri, Pungitius sinensis and Cottus hangiongensis were endangered fish species in this stream. Oncorhynchus keta, L. japonica and Tribolodon hakonensis were anadromous species, and Plecoglossus altivelis was an amphidromous species. The similarity index based on species composition and abundance clearly divided the fish community structure of the Baebong Stream into two sections fragmented by a weir installed into the stream. It is necessary to install a fish ways on the weirs for a fish migration and movements.