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기사명 저자명 페이지 원문 목차
Bacterial crosstalk via antimicrobial peptides on the human skin : therapeutics from a sustainable perspective Seon Mi Lee, Hye Lim Keum, Woo Jun Sul p. 1-11
Recent advances in CRISPR-Cas technologies for synthetic biology Song Hee Jeong, Ho Joung Lee, Sang Jun Lee p. 13-36
Chryseobacterium paludis sp. nov. and Chryseobacterium foetidum sp. nov. isolated from the aquatic environment, South Korea Miryung Kim, Yong-Seok Kim, Chang-Jun Cha p. 37-47
Effects of continuous straw returning on soil functional microorganisms and microbial communities Yunpeng Guan, Meikang Wu, Songhao Che, Shuai Yuan, Xue Yang, Siyuan Li, Ping Tian, Lei Wu, Meiying Yang, Zhihai Wu p. 49-62
Diversity and dynamics of marine arenicolous fungi in three seasides of the Korean Peninsula Jun Won Lee, Chang Wan Seo, Wonjun Lee, Ji Seon Kim, Ki Hyeong Park, Yoonhee Cho, Young Woon Lim p. 63-82
Genome sequencing highlights the plant cell wall degrading capacity of edible mushroom Stropharia rugosoannulata Mengpei Guo, Xiaolong Ma, Yan Zhou, Yinbing Bian, Gaolei Liu, Yingli Cai, Tianji Huang, Hongxia Dong, Dingjun Cai, Xueji Wan, Zhihong Wang, Yang Xiao, Heng Kang p. 83-93
Identification and functional analysis of acyl-acyl carrier protein Δ9 desaturase from Nannochloropsis oceanica Ruigang Yang, Hui Wang, Lingyun Zhu, Lvyun Zhu, Tianzhong Liu, Dongyi Zhang p. 95-107
Metformin regulates gut microbiota abundance to suppress M2 skewing of macrophages and colorectal tumorigenesis in mice Linfeng Fan, Xiangfu Zeng, Guofeng Xu p. 109-120
Potential use of Mycobacterium paragordonae for antimycobacterial drug screening systems Ga-Yeong Cha, Hyejun Seo, Jaehun Oh, Byoung-Jun Kim, Bum-Joon Kim p. 121-129
Recombinant protein mimicking the antigenic structure of the viral surface envelope protein reinforces induction of an antigen-specific and virus-neutralizing immune response against dengue virus Ju Kim, Tae Young Lim, Jisang Park, Yong-Suk Jang p. 131-143

참고문헌 (43건) : 자료제공( 네이버학술정보 )

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번호 참고문헌 국회도서관 소장유무
1 Alcock, B. P., Raphenya, A. R., Lau, T. T. Y., Tsang, K. K., Bouchard, M., Edalatmand, A., Huynh, W., Nguyen, A. V., Cheng, A. A., Liu, S., et al. (2020). CARD 2020: Antibiotic resistome surveillance with the comprehensive antibiotic resistance database. Nucleic Acids Research, 48, 517–525. 미소장
2 Baker, G. C., Smith, J. J., & Cowan, D. A. (2003). Review and re-analysis of domain-specific 16S primers. Journal of Microbiological Methods, 55, 541–555. 미소장
3 Bayliss, S. C., Thorpe, H. A., Coyle, N. M., Sheppard, S. K., & Feil, E. J. (2019). PIRATE: A fast and scalable pangenomics toolbox for clustering diverged orthologues in bacteria. GigaScience, 8, giz119. 미소장
4 Chen, X. Y., Zhao, R., Chen, Z. L., Liu, L., Li, X. D., & Li, Y. H. (2015). Chryseobacterium polytrichastri sp. nov. isolated from a moss (Polytrichastrum formosum) and emended description of the genus Chryseobacterium. Antonie van Leeuwenhoek, 107(2), 403–410. 미소장
5 Chin, C.-S., Alexander, D. H., Marks, P., Klammer, A. A., Drake, J., Heiner, C., Clum, A., Copeland, A., Huddleston, J., Eichler, E. E., et al. (2013). Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data. Nature Methods, 10, 563–569. 미소장
6 Chun, J., Oren, A., Ventosa, A., Christensen, H., Arahal, D. R., da Costa, M. S., Rooney, A. P., Yi, H., Xu, X.-W., De Meyer, S., et al. (2018). Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes. International Journal of Systematic and Evolutionary Microbiology, 68, 461–466. 미소장
7 Collins, M. D. (1985). 11 Analysis of isoprenoid quinones. Methods in Microbiology, 18, 329–366. 미소장
8 Dusa, A. (2021) venn: Draw venn diagrams 미소장
9 Edgar, R. C. (2004). MUSCLE: Multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research, 32, 1792–1797. 미소장
10 Felsenstein, J. (1985). Confidence limits on phylogenies: An approach using the bootstrap. Evolution, 39, 783–791. 미소장
11 Hahnke, R. L., Meier-Kolthoff, J. P., Garcia-Lopez, M., Mukherjee, S., Huntemann, M., Ivanova, N. N., et al. (2016). Genome-Based Taxonomic Classification of Bacteroidetes. Frontiers in Microbiology, 7, 2003. 미소장
12 Holmes, B., Owen, R. J., Steigerwalt, A. G., & Brenner, D. J. (1984). Flavobacterium gleum, a new species found in human clinical specimens. International Journal of Systematic Bacteriology, 34, 21–25. 미소장
13 Hyatt, D., Chen, G. L., Locascio, P. F., Land, M. L., Larimer, F. W., & Hauser, L. J. (2010). Prodigal: Prokaryotic gene recognition and translation initiation site identification. BMC Bioinformatics, 11, 119. 미소장
14 Ilardi, P., Fernandez, J., & Avendano-Herrera, R. (2009). Chryseobacterium piscicola sp. nov., isolated from diseased salmonid fish. International Journal of Systematic and Evolutionary Microbiology, 59, 3001–3005. 미소장
15 Im, W. T., Yang, J. E., Kim, S. Y., & Yi, T. H. (2011). Chryseobacterium ginsenosidimutans sp. nov., a bacterium with ginsenoside-converting activity isolated from soil of a Rhus vernicifera-cultivated field. International Journal of Systematic and Evolutionary Microbiology, 61, 1430–1435. 미소장
16 Jukes, T., & Cantor, C. (1969). Evolution of protein molecules. Mammalian Protein Metabolism, 3, 21–132. 미소장
17 Kämpfer, P., Vaneechoutte, M., Lodders, N., De Baere, T., Avesani, V., Janssens, M., Busse, H. J., & Wauters, G. (2009). Description of Chryseobacterium anthropi sp. nov. to accommodate clinical isolates biochemically similar to Kaistella koreensis and Chryseobacterium haifense proposal to reclassify Kaistella koreensis as Chryseobacterium koreense comb. nov. and emended description of the genus Chryseobacterium. International Journal of Systematic and Evolutionary Microbiology, 59, 2421–2428. 미소장
18 Kangale, L. J., Raoult, D., Ghigo, E., & Fournier, P.-E. (2021). Chryseobacterium schmidteae sp. nov. a novel bacterial species isolated from planarian Schmidtea mediterranea. Scientific Reports, 11, 11002. 미소장
19 Kim, K. K., Lee, K. C., Oh, H. M., & Lee, J. S. (2008). Chryseobacterium aquaticum sp. nov., isolated from a water reservoir. International Journal of Systematic and Evolutionary Microbiology, 58, 533–537. 미소장
20 Kim, J., Na, S.-I., Kim, D., & Chun, J. (2021). UBCG2: Up-to-date bacterial core genes and pipeline for phylogenomic analysis. Journal of Microbiology, 59, 609–615. 미소장
21 Kim, M., Oh, H.-S., Park, S.-C., & Chun, J. (2014). Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes. International Journal of Systematic and Evolutionary Microbiology, 64, 346–351. 미소장
22 Kumar, S., Stecher, G., Li, M., Knyaz, C., & Tamura, K. (2018). MEGA X: Molecular evolutionary genetics analysis across computing platforms. Molecular Biology and Evolution, 35, 1547–1549. 미소장
23 Lee, I., Ouk Kim, Y., Park, S. C., & Chun, J. (2016). OrthoANI: An improved algorithm and software for calculating average nucleotide identity. International Journal of Systematic and Evolutionary Microbiology, 66, 1100–1103. 미소장
24 Lucena, T., Ruvira, M. A., Macián, M. C., Arahal, D. R., Aznar, R., & Pujalte, M. J. (2021). Chryseobacterium potabilaquae sp. nov., Chryseobacterium aquaeductus sp. nov. and Chryseobacterium fistulae sp. nov., from drinking water systems. International Journal of Systematic and Evolutionary Microbiology, 71, 005020. 미소장
25 Manni, M., Berkeley, M. R., Seppey, M., & Zdobnov, E. M. (2021). BUSCO: Assessing genomic data quality and beyond. Current Protocols, 1, e323. 미소장
26 Meier-Kolthoff, J. P., Carbasse, J. S., Peinado-Olarte, R. L., & Göker, M. (2022). TYGS and LPSN: A database tandem for fast and reliable genome-based classification and nomenclature of prokaryotes. Nucleic Acids Research, 50, 801–807. 미소장
27 Minnikin, D. E., O’Donnell, A. G., Goodfellow, M., Alderson, G., Athalye, M., Schaal, A., & Parlett, J. H. (1984). An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. Journal of Microbiological Methods, 2, 233–241. 미소장
28 Montero-Calasanz, M. C., Goker, M., Rohde, M., Sproer, C., Schumann, P., Busse, H. J., Schmid, M., Klenk, H. P., Tindall, B. J., & Camacho, M. (2014). Chryseobacterium oleae sp. nov. an efficient plant growth promoting bacterium in the rooting induction of olive tree (Olea europaea L.) cuttings and emended descriptions of the genus Chryseobacterium, C. daecheongense, C. gambrini, C. gleum, C. joostei, C. jejuense, C. luteum, C. shigense, C. taiwanense, C. ureilyticum, and, C. vrystaatense. Systematic and Applied Microbiology, 37(5), 342–350. 미소장
29 Nei, M., & Kumar, S. (2000). Molecular evolution and phylogenetics. Oxford University Press. 미소장
30 Nicholson, A. C., Gulvik, C. A., Whitney, A. M., Humrighouse, B. W., Bell, M. E., Holmes, B., Steigerwalt, A. G., Villarma, A., Sheth, M., Batra, D., et al. (2020). Division of the genus Chryseobacterium: Observation of discontinuities in amino acid identity values, a possible consequence of major extinction events, guides transfer of nine species to the genus Epilithonimonas, eleven species to the genus Kaistella, and three species to the genus Halpernia gen. nov., with description of Kaistella daneshvariae sp. nov. and Epilithonimonas vandammei sp. nov. derived from clinical specimens. International Journal of Systematic and Evolutionary Microbiology, 70,... 미소장
31 Park, M. S., Jung, S. R., Lee, K. H., Lee, M. S., Do, J. O., Kim, S. B., & Bae, K. S. (2006). Chryseobacterium soldanellicola sp. nov. and Chryseobacterium taeanense sp. nov., isolated from roots of sand-dune plants. International Journal of Systematic and Evolutionary Microbiology, 56, 433–438. 미소장
32 Parte, A. C., SardàCarbasse, J., Meier-Kolthoff, J. P., Reimer, L. C., & Göker, M. (2020). List of prokaryotic names with standing in nomenclature (LPSN) moves to the DSMZ. International Journal of Systematic and Evolutionary Microbiology, 70, 5607–5612. 미소장
33 Rhoads, A., & Au, K. F. (2015). PacBio sequencing and its applications. Genomics, Proteomics and Bioinformatics, 13, 278–289. 미소장
34 Richter, M., & Rosselló-Móra, R. (2009). Shifting the genomic gold standard for the prokaryotic species definition. Proceedings of the National Academy of Sciences, 106, 19126–19131. 미소장
35 Rosselló-Móra, R., & Amann, R. (2015). Past and future species definitions for Bacteria and Archaea. Systematic and Applied Microbiology, 38, 209–216. 미소장
36 Sasser, M. (1990). Identification of bacteria by gas chromatography of cellular fatty acids. USFCC Newsletter, 20, 1–6. 미소장
37 Seemann, T. (2014). Prokka: Rapid prokaryotic genome annotation. Bioinformatics, 30, 2068–2069. 미소장
38 Strahan, B. L., Failor, K. C., Batties, A. M., Hayes, P. S., Cicconi, K. M., Mason, C. T., & Newman, J. D. (2011). Chryseobacterium piperi sp. nov., isolated from a freshwater creek. International Journal of Systematic and Evolutionary Microbiology, 61, 2162–2166. 미소장
39 Vandamme, P., Bernardet, J.-F., Segers, P., Kersters, K., & Holmes, B. (1994). NOTES: New perspectives in the classification of the Flavobacteria: Description of Chryseobacterium gen. nov., Bergeyella gen. nov., and Empedobacter nom. rev. International Journal of Systematic and Evolutionary Microbiology, 44, 827–831. 미소장
40 Wick, R. R., Judd, L. M., Gorrie, C. L., & Holt, K. E. (2017a). Completing bacterial genome assemblies with multiplex MinION sequencing. Microb. Genom., 3, e000132. 미소장
41 Wick, R. R., Judd, L. M., Gorrie, C. L., & Holt, K. E. (2017b). Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads. PLoS Computational Biology, 13, e1005595. 미소장
42 Wu, Y. F., Wu, Q. L., & Liu, S. J. (2013). Chryseobacterium taihuense sp. nov., isolated from a eutrophic lake, and emended descriptions of the genus Chryseobacterium, Chryseobacterium taiwanense, Chryseobacterium jejuense and Chryseobacterium indoltheticum. International Journal of Systematic and Evolutionary Microbiology, 63, 913–919. 미소장
43 Yoon, S. H., Ha, S. M., Kwon, S., Lim, J., Kim, Y., Seo, H., & Chun, J. (2017). Introducing EzBioCloud: A taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies. International Journal of Systematic and Evolutionary Microbiology, 67, 1613–1617. 미소장

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