대표어
한국학술지인용색인(NRF)
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Single nucleotide polymorphisms (SNPs) in chicken lysozyme (LYZ) gene were investigated in this study. The identification of SNPs in both exon and intron in LYZ gene has led to understanding of evolution for the domestic chicken populations. A total of 24 samples from two Korean native commercial chicken populations (CCPs) were used for the initial identification of SNPs by mixing three DNA samples for sequencing experiments. By comparing with red jungle fowl (RJF), two commercial chicken populations have 18 common polymorphisms. Between two commercial chicken populations, 15 polymorphisms were identified. Of the 33 polymorphisms identified, two indels (21 and 4 bp) were found. Whereas, only one polymorphism in exon 2 at the bp position 1426 was a non-synonymous substitution (p.Ala49Val), indicating the amino acid changes. The identified non-synonymous substitution (p.Ala49Val) is located close to the catalytic sites of the enzyme, which might affect its activity. In our investigation, the polymorphisms in LYZ gene can provide broad ideas for the variation of Korean native chicken populations from the ancestor of chicken breeds as well as the some biological functions of the LYZ gene.
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참고문헌 (33건) : 자료제공( 네이버학술정보 )
| 번호 | 참고문헌 | 국회도서관 소장유무 |
|---|---|---|
| 1 | One Subspecies of the Red Junglefowl (Gallus gallus gallus) Suffices as the Matriarchic Ancestor of all Domestic Breeds  |
미소장 |
| 2 | Monophyletic Origin and Unique Dispersal Patterns of Domestic Fowls |
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| 3 | Phylogenetic analysis of invertebrate lysozymes and the evolution of lysozyme function. |
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| 4 | Positive diversifying selection in avian Mx genes |
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| 5 | Cell |
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| 6 | Implications of RNA · RNA Splicing in Evolution of Eukaryotic Cells |
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| 7 | Genes in pieces: were they ever together? |
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| 8 | Variation in chicken populations may affect the enzymatic activity of lysozyme |
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| 9 | Contrasting evolution of diversity at two disease-associated chicken genes. |
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| 10 | Downing, T., D.J. Lynn, S. Connell. 2009c. Bioinformatic detection and population-level validation of selection at the chicken interleukin 4 receptor alpha chain gene. BMC. Evol. Biol. 9: 136. | 미소장 |
| 11 | Identification of the yellow skin gene reveals a hybrid origin of the domestic chicken. |
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| 12 | Fumihito, A., T. Miyake, S. Sumi. 1996. One subspecies of the red jungle fowl (Gallus gallus gallus) suffices as the matriarchic ancestor of all domestic breeds. Proc. Natl. Acad. Sci. USA. 91: 12505–12509. | 미소장 |
| 13 | Fumihito, A., T. Miyake, M. Takada. 1994. Monophyletic origin and unique dispersal patterns of domestic fowls. Proc. Natl. Acad. Sci. USA. 93: 6792–6795. | 미소장 |
| 14 | Cell |
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| 15 | Biological Identifications through DNA Barcodes |
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| 16 | Equilibrium measurements of cognate and noncognate interactions between aminoacyl transfer RNA synthetases and transfer RNA. |
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| 17 | Holler, E., J. Rupley, G. Hess. 1975b. Productive and unproductive lysozyme-chitosaccaride complexes. Kinetic investigations. Biochemistry. 14: 2377-2385. | 미소장 |
| 18 | Hou, Q.R., J.Y. Wang, H.H. Wang, Y. Li, G.X. Zhang, Y. Wei, Hassan. 2010. Analysis of polymorphisms in exons of the LYZ gene and effect on growth traits of Jinghai Yellow Chicken. Int. J. Poult. Sci. 9(4): 357-362. | 미소장 |
| 19 | Purifying selection and positive selection on the myxovirus resistance gene in mammals and chickens |
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| 20 | Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution |
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| 21 | Jolles, P. 1996. Lysozymes: Model enzymes in biochemistry and biology. Birkhauser Basel. | 미소장 |
| 22 | The chicken major histocompatibility complex and disease. |
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| 23 | Li, X.Y., L.J. Qu, J.F. Yao. 2006. Skewed allele frequencies of an Mx gene mutation with potential resistance to avian influenza virus in different chicken populations. Poult. Sci. 85: 1327–1329. | 미소장 |
| 24 | Multiple maternal origins of chickens: out of the Asian jungles. |
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| 25 | Liu, Z.G., C.Z. Lei, J. Luo, C. Ding, G.H. Chen, H. Chang, K.H. Wang, X.X. Liu, X.Y. Zhang, X.J. Xiao, S.L. Wu. 2004. Genetic variability of mtDNA sequences in Chinese native chicken breeds. Asian-Aust. J. Anim. Sci. 17(7): 903-909. | 미소장 |
| 26 | Mobegi, A.V., Chicken Diversity Consortium. 2005. Mitochondrial DNA D-loop sequences reveal the genetic diversity of African chicken. Proceedings of the 4th All Africa Conference on Animal Agriculture. September 20-24. | 미소장 |
| 27 | Molecular evidence for hybridization of species in the genus Gallus except for Gallus varius. |
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| 28 | Niu, D., Y. Fu, J. Luo, H. Ruan, X.P. Yu, G. Chen, Y.P. Zhang. 2002. The origin and genetic diversity of Chinese native chicken breeds. Biochem. Genet. 40(5/6): 163-174. | 미소장 |
| 29 | The chicken BF1 (classical MHC class I) gene shows evidence of selection for diversity in expression and in promoter and signal peptide regions |
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| 30 | Mitochondrial DNA-based analysis of genetic variation and relatedness among Sri Lankan indigenous chickens and the Ceylon junglefowl (Gallus lafayetti). |
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| 31 | Sippel, A.E., M. Theisen, U. Borgmeyer, U. Strech-Jurk, R.A.W. Rupp, A.W. Püschel, A. Muller, Hecht, A. Stief, T. Grussenmeyer. 1988. Regulatory function and molecular structure of DNaseI-hypersensitive elements in the chromatin domain of a gene. Architecture of Eukaryotic Genes 355-369. | 미소장 |
| 32 | The lysozyme enhancer: cell-specific activation of the chicken lysozyme gene by a far-upstream DNA element. |
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| 33 | Single locus typing of MHC class I and class II B loci in a population of red jungle fowl |
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